Miyakogusa Predicted Gene

Lj0g3v0288609.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SUJ1_LOTJA 531 96.1 97.1 (tr|I3SUJ1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G09760.1 373 78.7 88.3 | Symbols: U2A' | U2 small nuclear ribonucleoprotein A | chr1:3159476-3161603 REVERSE LENGTH=249
Medicago Medtr6g004180.2 467 85.7 91.0 | U2 small nuclear ribonucleoprotein A | HC | chr6:161626-156383 | 20130731
Soybean Glyma20g18440.2 492 86.0 92.7  
LJGI gnl|LJGI|TC60796 1431 96.5 96.5 similar to UniRef100_A7QTC6 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0288609.4 length: 280 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 6.126 20-41
43-64
65-86
89-110
114-135
IPR003603 U2A'/phosphoprotein 32 family A, C-terminal
HMMSmart SM00446 occurring 0.0075 128-146
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1e-24 13-154
HMMPanther PTHR10552 U2 1.3e-83 1-236
superfamily SSF52058 L 6.6e-32 3-157
Wolf-PSORT
Lj0g3v0288609.4	cyto 7, cyto_nucl 5.33333, chlo 3, cysk_nucl 1.66667, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0288609.4