Miyakogusa Predicted Gene
- Lj0g3v0288299.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q2PF04_TRIPR |
146 |
84.6 |
89.7 |
(tr|Q2PF04) Putative transporter-like protein OS=Trifolium pratense PE=2 SV=1 |
| TAIR_pep |
AT3G43790.1 |
92.4 |
65.6 |
80.3 |
| Symbols: ZIFL2 | zinc induced facilitator-like 2 | chr3:15655443-15658848 FORWARD LENGTH=478 |
| Medicago |
Medtr8g042780.1 |
146 |
84.6 |
92.3 |
| zinc induced facilitator-like protein | HC | chr8:16530996-16525894 | 20130731 |
| Soybean |
Glyma13g25630.1 |
135 |
76.9 |
84.6 |
|
| LJGI |
gnl|LJGI|TC60642 |
363 |
94.8 |
94.8 |
similar to UniRef100_A7QAL1 Cluster: Chromosome undetermined scaffold_71, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_71, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0288299.1 |
length: 78 aa. |
| IPR020846 |
Major facilitator superfamily domain |
| method |
AccNumber |
shortName |
E-value |
location |
| ProfileScan |
PS50850 |
MFS |
9.421 |
1-78 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
0.00056 |
2-61 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 35 |
57 |
- Wolf-PSORT
Lj0g3v0288299.1 cyto 6.5, cyto_E.R. 5, E.R. 2.5, cysk 2, mito 1, plas 1, golg 1, cysk_nucl 1, golg_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0288299.1 |
|