Miyakogusa Predicted Gene

Lj0g3v0287979.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JMY6_MEDTR 555 80.9 87.0 (tr|G7JMY6) Peptide transporter PTR1 OS=Medicago truncatula GN=MTR_4g015080 PE=3 SV=1
TAIR_pep AT3G54140.1 488 72.3 82.6 | Symbols: ATPTR1, PTR1 | peptide transporter 1 | chr3:20045885-20048154 REVERSE LENGTH=570
Medicago Medtr4g015080.1 555 80.9 87.0 | proton-dependent oligopeptide transport family protein | HC | chr4:4369051-4366700 | 20130731
Soybean Glyma01g27490.1 548 78.7 86.6  
LJGI gnl|LJGI|DC595323 270 91.4 91.4 similar to UniRef100_A7PP13 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0287979.4 length: 329 aa.
IPR000109 Proton-dependent oligopeptide transporter family
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11654 OLIGOPEPTIDE 8.6e-181 11-329
HMMPfam PF00854 PTR2 1.1e-70 105-298
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 7.4e-21 1-238
IPR018456 PTR2 family proton/oligopeptide symporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006857 oligopeptide transport    
Cellular Component GO:0016020 membrane    
PatternScan PS01022 PTR2_1 NA 94-118
PatternScan PS01023 PTR2_2 NA 191-203
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 8.4e-13 50-238
HMMPanther PTHR11654:SF37 OLIGOPEPTIDE 8.6e-181 11-329
Seg seg seg NA 224-238
Putative transmembrane regions
  From To
TM segments
SOSUI		 78 100
111 133
145 167
191 213
220 240
Wolf-PSORT
Lj0g3v0287979.4	nucl 5, cyto 4, plas 2, E.R. 2, cyto_pero 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0287979.4