Miyakogusa Predicted Gene

Lj0g3v0287979.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JMY6_MEDTR 1014 85.5 91.1 (tr|G7JMY6) Peptide transporter PTR1 OS=Medicago truncatula GN=MTR_4g015080 PE=3 SV=1
TAIR_pep AT3G54140.1 868 72.4 83.7 | Symbols: ATPTR1, PTR1 | peptide transporter 1 | chr3:20045885-20048154 REVERSE LENGTH=570
Medicago Medtr4g015080.1 1014 85.5 91.1 | proton-dependent oligopeptide transport family protein | HC | chr4:4369051-4366700 | 20130731
Soybean Glyma01g27490.1 992 81.8 89.1  
LJGI gnl|LJGI|BP071089 432 94.6 94.6 similar to UniRef100_O48542 Cluster: Peptide transporter; n=1; Hordeum vulgare|Rep: Peptide transporter - Hordeum vulgare (Barley), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0287979.1 length: 577 aa.
IPR000109 Proton-dependent oligopeptide transporter family
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11654 OLIGOPEPTIDE 0 11-575
HMMPfam PF00854 PTR2 1.6e-112 105-505
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 2.7e-33 1-566
IPR018456 PTR2 family proton/oligopeptide symporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006857 oligopeptide transport    
Cellular Component GO:0016020 membrane    
PatternScan PS01022 PTR2_1 NA 94-118
PatternScan PS01023 PTR2_2 NA 191-203
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 4.4e-12 50-238
HMMPanther PTHR11654:SF37 OLIGOPEPTIDE 0 11-575
Seg seg seg NA 224-238
Putative transmembrane regions
  From To
TM segments
SOSUI		 78 100
111 133
145 167
191 213
220 240
333 355
384 405
421 443
456 478
506 528
543 564
Wolf-PSORT
Lj0g3v0287979.1	plas 7, E.R. 3, nucl 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0287979.1