Miyakogusa Predicted Gene

Lj0g3v0287859.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JSX5_MEDTR 258 47.5 59.8 (tr|G7JSX5) F-box family protein OS=Medicago truncatula GN=MTR_4g050930 PE=4 SV=1
TAIR_pep AT4G14096.1 66.2 25.6 41.0 | Symbols: | F-box/RNI-like superfamily protein | chr4:8124606-8126202 FORWARD LENGTH=468
Medicago Medtr4g050930.1 258 47.5 59.8 | F-box/RNI superfamily protein | HC | chr4:36591608-36584820 | 20130731
Soybean Glyma06g10300.1 244 49.1 60.8  
LJGI gnl|LJGI|TC61828 408 94.1 94.1 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0287859.1 length: 351 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 0.00014 31-67
superfamily SSF81383 F-box 4.4e-10 27-72
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.2e-12 27-342
HMMPanther PTHR32212 FAMILY 5.4e-20 10-327
Seg seg seg NA 165-185
259-272
331-348
Putative transmembrane regions
  From To
TM segments
SOSUI		 303 325
Wolf-PSORT
Lj0g3v0287859.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0287859.1