Miyakogusa Predicted Gene

Lj0g3v0287499.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MGC8_SOYBN 1065 76.6 84.2 (tr|K7MGC8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G12080.3 511 40.2 60.4 | Symbols: MSL10, ATMSL10 | mechanosensitive channel of small conductance-like 10 | chr5:3898182-3900923 REVERSE LENGTH=734
Medicago Medtr8g071250.1 1030 73.8 80.4 | mechanosensitive ion channel family protein | HC | chr8:30242973-30236784 | 20130731
Soybean Glyma16g08150.1 878 82.0 88.3  
LJGI gnl|LJGI|TC66057 952 100.0 100.0 weakly similar to UniRef100_A7QN75 Cluster: Chromosome undetermined scaffold_131, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_131, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0287499.1 length: 690 aa.
IPR006685 Mechanosensitive ion channel MscS
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00924 MS_channel 1.6e-22 463-668
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 9.6e-13 506-572
no_ID  
Gene3D G3DSA:2.30.30.60 no description 1.9e-10 522-571
HMMPanther PTHR31618 FAMILY 1.2e-255 20-683
HMMPanther PTHR31618:SF0 SUBFAMILY 1.2e-255 20-683
Seg seg seg NA 69-94
368-379
464-480
Putative transmembrane regions
  From To
TM segments
SOSUI		 110 132
157 179
194 215
229 251
473 495
507 529
Wolf-PSORT
Lj0g3v0287499.1	plas 9, E.R. 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0287499.1