Miyakogusa Predicted Gene

Lj0g3v0287459.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KDY6_SOYBN 687 90.4 95.7 (tr|I1KDY6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G15380.1 578 76.0 89.6 | Symbols: | Plasma-membrane choline transporter family protein | chr3:5193319-5196435 FORWARD LENGTH=700
Medicago Medtr8g059125.1 687 89.8 95.2 | plasma-membrane choline transporter family protein | HC | chr8:20671850-20679163 | 20130731
Soybean Glyma06g38120.1 687 90.4 95.7  
LJGI gnl|LJGI|AV420640 595 100.0 100.0 similar to UniRef100_A7P1K2 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0287459.2 length: 374 aa.
IPR007603 Choline transporter-like
method AccNumber shortName E-value location
HMMPanther PTHR12385 CTL 1.7e-251 1-374
HMMPfam PF04515 Choline_transpo 1e-64 122-373
no_ID  
HMMPanther PTHR12385:SF5 UNCHARACTERIZED 1.7e-251 1-374
Putative transmembrane regions
  From To
TM segments
SOSUI		 30 52
63 85
126 148
165 187
221 243
247 268
Wolf-PSORT
Lj0g3v0287459.2	plas 8, E.R. 2, golg 2, extr 1, vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0287459.2