Miyakogusa Predicted Gene

Lj0g3v0287449.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KX65_SOYBN 697 71.3 83.9 (tr|K7KX65) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G21705.1 471 49.5 67.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11533257-11534817 REVERSE LENGTH=492
Medicago Medtr8g059115.1 604 70.5 84.5 | PPR containing plant-like protein | HC | chr8:20661178-20662671 | 20130731
Soybean Glyma06g38110.1 601 71.8 84.7  
LJGI gnl|LJGI|CN825203 922 99.8 99.8 similar to UniRef100_A7P1K5 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0287449.2 length: 504 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.45 145-171
281-304
318-344
354-380
387-410
HMMPfam PF13812 PPR_3 0.0034 176-207
HMMTigr TIGR00756 PPR: 8.4e-05 177-209
354-384
ProfileScan PS51375 PPR 5.623 70-104
173-207
139-169
208-242
279-309
244-278
349-383
314-348
384-414
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.3e-11 381-414
no_ID  
Coil coil coiled-coil NA 480-501
HMMPanther PTHR24015 FAMILY 6.6e-181 34-502
HMMPanther PTHR24015:SF172UNKNOWN PROTEIN 6.6e-181 34-502
superfamily SSF48452 TPR-like 9.2e-05 318-413
123-340
Wolf-PSORT
Lj0g3v0287449.2	chlo 12, mito 1.5, cyto_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0287449.2