Miyakogusa Predicted Gene
- Lj0g3v0287339.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LLS0_SOYBN |
243 |
72.0 |
79.4 |
(tr|I1LLS0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G30130.1 |
219 |
82.8 |
88.1 |
| Symbols: ASL5, LBD12, PCK1 | Lateral organ boundaries (LOB) domain family protein | chr2:12868740-12869684 FORWARD LENGTH=193 |
| Medicago |
Medtr3g031660.1 |
234 |
81.8 |
90.2 |
| lateral organ boundaries (LOB) domain protein | HC | chr3:26664649-26666255 | 20130731 |
| Soybean |
Glyma11g29450.1 |
243 |
72.0 |
79.4 |
|
| LJGI |
gnl|LJGI|TC72156 |
79.8 |
81.2 |
81.2 |
homologue to UniRef100_Q9SHE9 Cluster: LOB domain-containing protein 4; n=1; Arabidopsis thaliana|Rep: LOB domain-containing protein 4 - Arabidopsis thaliana (Mouse-ear cress), partial (67%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0287339.1 |
length: 175 aa. |
| IPR004883 |
Lateral organ boundaries, LOB |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03195 |
DUF260 |
2e-41 |
6-105 |
| ProfileScan |
PS50891 |
LOB |
26.370 |
5-106 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
85-106 |
| HMMPanther |
PTHR31301 |
FAMILY |
4.4e-82 |
1-114 |
| Seg |
seg |
seg |
NA |
143-167 |
- Wolf-PSORT
Lj0g3v0287339.1 chlo 5, nucl 4.5, cyto_nucl 3.5, cyto 1.5, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0287339.1 |
|