Miyakogusa Predicted Gene

Lj0g3v0286969.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3RZM0_MEDTR 517 65.8 71.6 (tr|I3RZM0) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G08700.1 483 59.3 69.7 | Symbols: PS1 | Presenilin-1 | chr1:2769885-2771348 REVERSE LENGTH=453
Medicago Medtr7g087200.1 517 65.8 71.6 | presenilin plant-like protein | HC | chr7:33962733-33960774 | 20130731
Soybean Glyma19g29800.2 504 64.9 71.7  
LJGI gnl|LJGI|TC72555 1461 99.9 99.9 similar to UniRef100_A7Q9Z6 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0286969.1 length: 438 aa.
IPR001108 Peptidase A22A, presenilin
method AccNumber shortName E-value location
Molecular Function GO:0004190 aspartic-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR01072 PRESENILIN 5e-10 17-27
174-181
191-208
HMMPanther PTHR10202 PRESENILIN 8.5e-165 1-438
HMMPfam PF01080 Presenilin 5e-85 10-428
IPR006639 Peptidase A22, presenilin signal peptide
Molecular Function GO:0004190 aspartic-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
HMMSmart SM00730 Presenilin, 2e-92 64-424
no_ID  
HMMPanther PTHR10202:SF13 PRESENILIN 8.5e-165 1-438
Seg seg seg NA 26-42
183-197
260-267
282-300
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
65 87
100 122
131 153
156 178
184 206
366 388
410 432
Wolf-PSORT
Lj0g3v0286969.1	plas 5, E.R. 3, nucl_plas 3, golg_plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0286969.1