Miyakogusa Predicted Gene
- Lj0g3v0286589.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MQ73_SOYBN |
903 |
87.6 |
92.6 |
(tr|K7MQ73) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G58510.1 |
674 |
67.6 |
81.2 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23648287-23654421 REVERSE LENGTH=963 |
| Medicago |
Medtr3g465600.1 |
916 |
87.5 |
92.2 |
| Rab3 GTPase-activating protein catalytic subunit | HC | chr3:26564199-26578240 | 20130731 |
| Soybean |
Glyma11g29320.1 |
862 |
81.5 |
86.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0286589.1 |
length: 540 aa. |
| IPR026147 |
Rab3 GTPase-activating protein catalytic subunit |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005097 |
Rab GTPase activator activity |
|
|
| HMMPanther |
PTHR21422 |
FAMILY |
2.7e-248 |
25-519 |
| no_ID |
|
| HMMPanther |
PTHR21422:SF3 |
SUBFAMILY |
2.7e-248 |
25-519 |
| Seg |
seg |
seg |
NA |
2-40 |
- Wolf-PSORT
Lj0g3v0286589.1 cyto 9, nucl 3, mito 1, pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0286589.1 |
|