Miyakogusa Predicted Gene

Lj0g3v0286539.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LUB6_SOYBN 467 61.2 70.3 (tr|K7LUB6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G44150.1 167 45.5 63.8 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:17763797-17765101 REVERSE LENGTH=355

Medicago Medtr4g079100.1 360 56.4 66.4 | hypothetical protein | HC | chr4:30531357-30537508 | 20130731

Soybean Glyma12g13830.1 230 56.4 64.3

LJGI gnl|LJGI|TC79639 2456 100.0 100.0 weakly similar to UniRef100_A7R5R9 Cluster: Chromosome chr19 scaffold_1037, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_1037, whole genome shotgun sequence - Vitis vinifera (Grape), partial (70%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0286539.1 length: 412 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 227-236
388-402

Wolf-PSORT

Lj0g3v0286539.1 nucl 5, mito 4, chlo 3, cysk_nucl 3, nucl_plas 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0286539.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LUB6_SOYBN	467	61.2	70.3	(tr\|K7LUB6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G44150.1	167	45.5	63.8	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). \| chr5:17763797-17765101 REVERSE LENGTH=355
Medicago	Medtr4g079100.1	360	56.4	66.4	\| hypothetical protein \| HC \| chr4:30531357-30537508 \| 20130731
Soybean	Glyma12g13830.1	230	56.4	64.3
LJGI	gnl\|LJGI\|TC79639	2456	100.0	100.0	weakly similar to UniRef100_A7R5R9 Cluster: Chromosome chr19 scaffold_1037, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr19 scaffold_1037, whole genome shotgun sequence - Vitis vinifera (Grape), partial (70%)

no_ID
Lj0g3v0286539.1				length: 412 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	227-236 388-402