Miyakogusa Predicted Gene
- Lj0g3v0286519.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M213_SOYBN |
263 |
37.5 |
55.2 |
(tr|K7M213) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G80960.1 |
68.9 |
24.5 |
41.2 |
| Symbols: | F-box and Leucine Rich Repeat domains containing protein | chr1:30416065-30418220 FORWARD LENGTH=486 |
| Medicago |
Medtr6g034190.1 |
166 |
28.6 |
48.3 |
| FBD, F-box and LRR protein | LC | chr6:11588681-11584449 | 20130731 |
| Soybean |
Glyma13g33610.1 |
89.4 |
30.6 |
45.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0286519.1 |
length: 454 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50181 |
FBOX |
9.206 |
1-53 |
| superfamily |
SSF81383 |
F-box |
8.2e-07 |
2-42 |
| IPR006566 |
FBD |
| HMMPfam |
PF08387 |
FBD |
2.4e-05 |
358-397 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
7.1e-10 |
2-329 |
| Seg |
seg |
seg |
NA |
158-168 |
- Wolf-PSORT
Lj0g3v0286519.1 cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0286519.1 |
|