Miyakogusa Predicted Gene

Lj0g3v0283799.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MEE0_SOYBN 4240 72.3 81.5 (tr|K7MEE0) Midasin OS=Glycine max PE=3 SV=1
TAIR_pep AT1G67120.1 2885 52.4 67.8 | Symbols: | ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding | chr1:25069727-25095526 REVERSE LENGTH=5393
Medicago Medtr8g018890.1 4226 73.4 81.8 | midasin | HC | chr8:6525405-6567753 | 20130731
Soybean Glyma16g00630.2 4109 70.1 79.1  
LJGI gnl|LJGI|FS337473 561 100.0 100.0 weakly similar to UniRef100_A7P6L7 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0283799.1 length: 2871 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.9 339-464
650-896
1053-1198
1361-1597
1786-1973
2096-2342
IPR011704 ATPase, dynein-related, AAA domain
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF07728 AAA_5 9.3e-16 342-461
653-714
800-887
1056-1192
1364-1411
1488-1587
1789-1928
IPR025662 Sigma-54 interaction domain, ATP-binding site 1
PatternScan PS00675 SIGMA54_INTERACT_1 NA 654-667
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 0.00023 1032-1303
1779-2038
1342-1652
603-968
302-589
2081-2363
2099-2247
no_ID  
Gene3D G3DSA:3.40.50.300 no description 7.6e-30 328-495
794-900
1040-1209
1498-1592
1779-1945
2262-2359
HMMPanther PTHR22908 MIDASIN-RELATED 0 5-2807
HMMPanther PTHR22908:SF25 SUBFAMILY 0 5-2807
Seg seg seg NA 892-901
1734-1745
1946-1963
2481-2496
Wolf-PSORT
Lj0g3v0283799.1	cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0283799.1