Miyakogusa Predicted Gene

Lj0g3v0283589.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL N1NG23_9FABA 797 66.9 79.2 (tr|N1NG23) Putative glycosyl phosphatidyl inositol transamidase like protein OS=Arachis ipaensis GN=ARAX_AIPA147A20-001 PE=4 SV=1
TAIR_pep AT5G24830.1 476 43.7 62.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:8531226-8533266 FORWARD LENGTH=593
Medicago Medtr1g010020.2 754 64.0 76.6 | PPR containing plant-like protein | HC | chr1:1683287-1686329 | 20130731
Soybean Glyma15g37750.1 591 63.5 72.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0283589.2 length: 596 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.55 284-312
389-416
425-454
568-591
HMMPfam PF12854 PPR_1 1.6e-07 170-196
HMMPfam PF13041 PPR_2 4.6e-14 210-259
317-363
456-505
HMMTigr TIGR00756 PPR: 9.2e-06 177-211
213-246
248-275
287-318
319-353
354-388
424-458
459-493
494-527
ProfileScan PS51375 PPR 6.193 175-210
140-174
211-245
246-280
317-351
282-316
352-386
387-421
422-456
457-491
492-526
527-561
562-596
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.8e-05 424-556
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-114 148-593
HMMPanther PTHR24015:SF0 SUBFAMILY 1.2e-114 148-593
superfamily SSF48452 TPR-like 0.0076 211-311
422-504
Wolf-PSORT
Lj0g3v0283589.2	chlo 9, cyto 3, cysk 1.5, cyto_nucl 1.5, cyto_pero 1.5, cysk_plas 1.5, cyto_E.R. 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0283589.2