Miyakogusa Predicted Gene

Lj0g3v0282469.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LFZ8_MEDTR 753 44.6 59.3 (tr|G7LFZ8) NBS-LRR resistance-like protein 4G OS=Medicago truncatula GN=MTR_8g038820 PE=4 SV=1
TAIR_pep AT5G17680.1 564 39.8 59.1 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr1g052170.2 931 66.7 78.9 | disease resistance protein (TIR-NBS-LRR class) | HC | chr1:21057285-21062438 | 20130731
Soybean Glyma15g02870.1 733 43.2 58.9  
LJGI gnl|LJGI|FS333816 87.7 83.3 83.3 weakly similar to UniRef100_A2Q1X9 Cluster: TIR; n=1; Medicago truncatula|Rep: TIR - Medicago truncatula (Barrel medic), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0282469.1 length: 1045 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.3e-37 21-152
HMMSmart SM00255 Toll 1.8e-45 18-158
ProfileScan PS50104 TIR 27.527 17-158
superfamily SSF52200 Toll/Interleukin 1.4e-45 7-161
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 4.4e-25 218-233
294-308
385-399
839-855
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.2 634-652
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 5.7e-40 201-467
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 0.00019 611-630
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.4e-26 178-422
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 4.5e-23 17-152
Gene3D G3DSA:3.40.50.300 no description 9.4e-08 214-334
Gene3D G3DSA:3.80.10.10 no description 3.9e-26 550-874
HMMPanther PTHR11017 LEUCINE-RICH 1.9e-240 9-944
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.9e-240 9-944
Seg seg seg NA 298-311
841-866
superfamily SSF46785 "Winged 4.9e-20 420-527
superfamily SSF52058 L 8e-40 501-889
Wolf-PSORT
Lj0g3v0282469.1	nucl 5, cyto 4, mito 1, plas 1, pero 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0282469.1