Miyakogusa Predicted Gene

Lj0g3v0282389.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LWX8_SOYBN 307 49.5 57.2 (tr|I1LWX8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G02340.1 154 45.5 64.2 | Symbols: | RING/U-box superfamily protein | chr3:477032-478261 FORWARD LENGTH=409
Medicago Medtr6g016350.1 260 48.4 58.7 | zinc finger, C3HC4 type (RING finger) protein | HC | chr6:6040819-6042570 | 20130731
Soybean Glyma13g06960.1 293 48.2 55.8  
LJGI gnl|LJGI|TC75582 1074 100.0 100.0 similar to UniRef100_Q9SXW6 Cluster: Ring finger protein; n=1; Cicer arietinum|Rep: Ring finger protein - Cicer arietinum (Chickpea) (Garbanzo), partial (79%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0282389.1 length: 378 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.6e-14 305-346
HMMSmart SM00184 Ring 3.1e-06 305-345
ProfileScan PS50089 ZF_RING_2 12.106 305-346
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.2e-16 302-349
no_ID  
HMMPanther PTHR22763 RING 1.5e-45 252-360
HMMPanther PTHR22763:SF0 SUBFAMILY 1.5e-45 252-360
Seg seg seg NA 28-50
107-125
176-186
195-202
superfamily SSF57850 RING/U-box 7.7e-20 290-352
Wolf-PSORT
Lj0g3v0282389.1	nucl 7, cyto 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0282389.1