Miyakogusa Predicted Gene

Lj0g3v0282089.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D3GBU7_LOTJA 1110 91.6 91.9 (tr|D3GBU7) Auxin response factor 3b OS=Lotus japonicus GN=ARF3b PE=2 SV=1
TAIR_pep AT2G33860.1 432 59.0 71.2 | Symbols: ETT, ARF3 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related | chr2:14325444-14328613 REVERSE LENGTH=608
Medicago Medtr2g014770.1 771 73.7 78.4 | auxin response factor 3 | HC | chr2:4274889-4270421 | 20130731
Soybean Glyma13g30750.1 837 73.3 79.3  
LJGI gnl|LJGI|TC57738 1025 96.1 96.1 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin response factor; n=1; Medicago truncatula|Rep: Transcriptional factor B3; Auxin response factor - Medicago truncatula (Barrel medic), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0282089.1 length: 633 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 3.2e-23 45-146
HMMSmart SM01019 B3 2e-23 45-147
ProfileScan PS50863 B3 13.437 45-147
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 5.7e-35 171-252
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 2.2e-39 39-148
superfamily SSF101936 DNA-binding 6.4e-46 28-185
no_ID  
HMMPanther PTHR31384 FAMILY 4.1e-146 42-280
Seg seg seg NA 21-35
412-423
446-458
Wolf-PSORT
Lj0g3v0282089.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0282089.1