Miyakogusa Predicted Gene

Lj0g3v0281779.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KCR2_SOYBN 641 65.9 77.7 (tr|I1KCR2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G16390.1 525 54.1 68.1 | Symbols: ATOCT3, 3-Oct | organic cation/carnitine transporter 3 | chr1:5602921-5604477 FORWARD LENGTH=518
Medicago Medtr8g447340.1 673 66.3 76.0 | organic cation/carnitine transporter | HC | chr8:18601016-18599285 | 20130731
Soybean Glyma06g20500.1 639 66.1 77.8  
LJGI gnl|LJGI|TC76360 1104 99.6 99.6 similar to UniRef100_A7QMK9 Cluster: Chromosome chr19 scaffold_126, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_126, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0281779.1 length: 530 aa.
IPR005828 General substrate transporter
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 1.2e-26 96-508
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 1.4e-41 108-517
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 18.758 50-505
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.1e-10 125-272
332-516
HMMPanther PTHR24064 FAMILY 8.4e-232 9-519
HMMPanther PTHR24064:SF104SUBFAMILY NOT 8.4e-232 9-519
Seg seg seg NA 11-25
160-179
471-488
Putative transmembrane regions
  From To
TM segments
SOSUI		 133 155
159 181
219 241
247 269
405 427
451 473
480 502
Wolf-PSORT
Lj0g3v0281779.1	nucl 6, plas 3, cysk_nucl 3, cyto 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0281779.1