Miyakogusa Predicted Gene

Lj0g3v0281769.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LGI1_SOYBN 865 82.9 88.9 (tr|I1LGI1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G48150.1 786 74.4 84.9 | Symbols: APC8, CDC23 | anaphase-promoting complex subunit 8 | chr3:17779800-17782565 REVERSE LENGTH=579
Medicago Medtr8g021140.1 843 82.4 88.9 | anaphase promoting complex subunit 8 | HC | chr8:7534715-7528414 | 20130731
Soybean Glyma11g02890.1 865 82.9 88.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0281769.1 length: 530 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 7.7e-05 288-320
IPR007192 Cdc23
Cellular Component GO:0005680 anaphase-promoting complex    
Biological Process GO:0030071 regulation of mitotic metaphase/anaphase transition    
HMMPfam PF04049 APC8 6e-27 18-108
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.8e-16 129-387
388-494
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 28.596 287-458
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 31 219-252
287-320
321-354
355-388
389-424
425-458
466-499
ProfileScan PS50005 TPR 6.962 219-252
287-320
321-354
355-388
425-458
no_ID  
HMMPanther PTHR12558 CELL 7.2e-230 40-524
HMMPanther PTHR12558:SF10 CELL 7.2e-230 40-524
HMMPfam PF13414 TPR_11 5.2e-11 323-382
HMMPfam PF13424 TPR_12 1.9e-08 424-494
Seg seg seg NA 84-95
superfamily SSF48452 TPR-like 4e-09 189-324
superfamily SSF81901 HCP-like 5e-30 286-507
Wolf-PSORT
Lj0g3v0281769.1	chlo 10, nucl 2, cyto 1, mito 1, cysk_nucl 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0281769.1