Miyakogusa Predicted Gene

Lj0g3v0279449.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q1B8_MEDTR 122 44.0 52.0 (tr|A2Q1B8) Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation region; Homeodomain-like OS=Medicago truncatula GN=MTR_7g010300 PE=4 SV=1
TAIR_pep AT5G39760.1 96.3 74.5 89.1 | Symbols: AtHB23, HB23, ZHD10 | homeobox protein 23 | chr5:15911543-15912547 FORWARD LENGTH=334
Medicago Medtr7g010300.1 122 44.0 52.0 | homeobox domain, ZF-HD class protein | HC | chr7:2495416-2494003 | 20130731
Soybean Glyma13g05420.1 112 59.3 71.4  
LJGI gnl|LJGI|TC71222 335 100.0 100.0 similar to UniRef100_A2Q1B8 Cluster: Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation region; Homeodomain-like; n=1; Medicago truncatula|Rep: Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation region; Homeodomain-like - Medicago truncatula (Barrel medic), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0279449.1 length: 260 aa.
IPR006455 Homeodomain, ZF-HD class
method AccNumber shortName E-value location
HMMTigr TIGR01565 homeo_ZF_HD: 9.6e-27 121-178
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.4e-29 113-182
superfamily SSF46689 Homeodomain-like 8e-21 105-184
no_ID  
HMMPanther PTHR31948 FAMILY 1.8e-37 108-235
HMMPanther PTHR31948:SF0 SUBFAMILY 1.8e-37 108-235
Seg seg seg NA 3-16
31-50
59-97
117-129
187-200
Wolf-PSORT
Lj0g3v0279449.1	chlo 5, nucl 3, mito 3, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0279449.1