Miyakogusa Predicted Gene

Lj0g3v0278949.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J3H4_MEDTR 273 91.6 94.4 (tr|G7J3H4) Class III HD-Zip protein OS=Medicago truncatula GN=MTR_3g109800 PE=3 SV=1
TAIR_pep AT1G52150.3 242 82.5 90.5 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr1:19410118-19413961 REVERSE LENGTH=794
Medicago Medtr3g109800.2 276 91.7 94.4 | class III homeodomain leucine zipper protein | HC | chr3:51353936-51359759 | 20130731
Soybean Glyma06g09100.1 256 89.9 94.2  
LJGI gnl|LJGI|TC70081 99.6 82.2 82.2 homologue to UniRef100_A8E664 Cluster: Class III HD-Zip protein CNA2; n=1; Medicago truncatula|Rep: Class III HD-Zip protein CNA2 - Medicago truncatula (Barrel medic), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0278949.2 length: 144 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 2.4e-17 21-79
HMMSmart SM00389 Homeodomain 1.7e-15 18-84
ProfileScan PS50071 HOMEOBOX_2 15.516 16-80
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.9e-19 4-79
superfamily SSF46689 Homeodomain-like 3.4e-16 9-91
no_ID  
Coil coil coiled-coil NA 86-118
HMMPanther PTHR24326 FAMILY 1.1e-41 10-143
HMMPanther PTHR24326:SF63 SUBFAMILY 1.1e-41 10-143
Wolf-PSORT
Lj0g3v0278949.2	chlo 7, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0278949.2