Miyakogusa Predicted Gene

Lj0g3v0278349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K1P2_SOYBN 698 75.7 84.4 (tr|K7K1P2) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT5G46330.1 192 34.2 46.3 | Symbols: FLS2 | Leucine-rich receptor-like protein kinase family protein | chr5:18791802-18795407 FORWARD LENGTH=1173
Medicago Medtr1g040615.1 215 34.8 51.4 | LRR receptor-like kinase family protein | LC | chr1:15030390-15038494 | 20130731
Soybean Glyma08g40560.1 612 71.4 80.5  
LJGI gnl|LJGI|TC59974 1382 100.0 100.0 weakly similar to UniRef100_A7Q2M7 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0278349.1 length: 482 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.17 229-250
374-397
ProfileScan PS51450 LRR 4.847 132-154
156-178
180-203
204-226
228-251
278-300
326-348
374-394
350-372
424-446
448-470
472-482
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 26 130-152
154-178
202-225
226-250
300-323
324-348
372-397
446-470
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 1.1e-07 31-68
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 3.2e-07 131-168
no_ID  
FPrintScan PR00019 LEURICHRPT 8e-06 229-242
372-385
Gene3D G3DSA:3.80.10.10 no description 6.8e-51 29-268
270-482
HMMPanther PTHR24420 FAMILY 4.5e-110 87-482
HMMPfam PF13855 LRR_8 2.4e-06 302-361
425-482
HMMSmart SM00365 Leucine-rich 54 130-156
178-199
202-221
226-252
324-350
372-389
Seg seg seg NA 106-120
166-192
superfamily SSF52058 L 3.5e-48 27-269
270-482
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 21
Wolf-PSORT
Lj0g3v0278349.1	plas 7, vacu 3, E.R. 3, E.R._vacu 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0278349.1