Miyakogusa Predicted Gene
- Lj0g3v0277159.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LZI9_SOYBN |
434 |
62.8 |
78.6 |
(tr|I1LZI9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G03610.1 |
355 |
54.6 |
69.1 |
| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:915650-918326 FORWARD LENGTH=359 |
| Medicago |
Medtr1g060490.1 |
437 |
63.7 |
76.6 |
| GDSL-like lipase/acylhydrolase | HC | chr1:26320337-26324005 | 20130731 |
| Soybean |
Glyma13g21970.1 |
434 |
62.8 |
78.6 |
|
| LJGI |
gnl|LJGI|TC63005 |
474 |
80.9 |
80.9 |
weakly similar to UniRef100_A7PPH3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0277159.1 |
length: 355 aa. |
| IPR001087 |
Lipase, GDSL |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| Molecular Function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
|
|
| HMMPfam |
PF00657 |
Lipase_GDSL |
1.2e-18 |
45-343 |
| IPR013831 |
SGNH hydrolase-type esterase domain |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| Gene3D |
G3DSA:3.40.50.1110 |
no description |
5.5e-56 |
39-345 |
| no_ID |
|
| HMMPanther |
PTHR22835 |
ZINC |
5.6e-58 |
1-345 |
| Seg |
seg |
seg |
NA |
9-25 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
7 |
28 |
- Wolf-PSORT
Lj0g3v0277159.1 chlo 4, extr 4, E.R. 2, nucl 1, cyto 1, mito 1, vacu 1, cyto_nucl 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0277159.1 |
|