Miyakogusa Predicted Gene
- Lj0g3v0276849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JA00_MEDTR |
393 |
52.3 |
68.2 |
(tr|G7JA00) NBS-containing resistance-like protein OS=Medicago truncatula GN=MTR_3g069210 PE=4 SV=1 |
| TAIR_pep |
AT3G46730.1 |
169 |
33.4 |
52.6 |
| Symbols: | NB-ARC domain-containing disease resistance protein | chr3:17213069-17215612 REVERSE LENGTH=847 |
| Medicago |
Medtr3g069210.1 |
393 |
52.3 |
68.2 |
| NB-ARC domain disease resistance protein | HC | chr3:30990418-30987078 | 20130731 |
| Soybean |
Glyma20g08290.1 |
374 |
49.6 |
63.9 |
|
| LJGI |
gnl|LJGI|TC77409 |
63.9 |
87.5 |
87.5 |
weakly similar to UniRef100_A7PG70 Cluster: Chromosome chr6 scaffold_15, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_15, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0276849.1 |
length: 479 aa. |
| IPR002182 |
NB-ARC |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0043531 |
ADP binding |
|
|
| HMMPfam |
PF00931 |
NB-ARC |
9.9e-34 |
25-173 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
4e-08 |
25-117 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
5.3e-14 |
263-441 |
| HMMPanther |
PTHR23155 |
LEUCINE-RICH |
1.8e-86 |
35-434 |
| HMMPanther |
PTHR23155:SF152OS06G0287700 |
PROTEIN |
1.8e-86 |
35-434 |
| Seg |
seg |
seg |
NA |
1-10 |
| superfamily |
SSF52058 |
L |
7.4e-21 |
210-477 |
- Wolf-PSORT
Lj0g3v0276849.1 chlo 7, cyto 3, nucl 1, mito 1, extr 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0276849.1 |
|