Miyakogusa Predicted Gene
- Lj0g3v0276439.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TLQ0_SOYBN |
375 |
82.2 |
87.7 |
(tr|C6TLQ0) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT2G41760.1 |
306 |
66.8 |
81.5 |
| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function WDYHV (InterPro:IPR019161); Has 201 Blast hits to 201 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:17422864-17424255 FORWARD LENGTH=221 |
| Medicago |
Medtr7g034355.1 |
380 |
82.5 |
88.5 |
| amine-terminal glutamine amidohydrolase | HC | chr7:12846526-12844015 | 20130731 |
| Soybean |
Glyma10g20590.1 |
375 |
82.2 |
87.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0276439.1 |
length: 218 aa. |
| IPR023128 |
Protein N-terminal glutamine amidohydrolase, alpha beta roll |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016811 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
|
|
| Gene3D |
G3DSA:3.10.620.10 |
no description |
1.1e-67 |
4-212 |
| HMMPfam |
PF09764 |
Nt_Gln_amidase |
2.4e-61 |
13-212 |
| no_ID |
|
| HMMPanther |
PTHR13035 |
UNCHARACTERIZED |
7.3e-83 |
4-217 |
| HMMPanther |
PTHR13035:SF0 |
SUBFAMILY |
7.3e-83 |
4-217 |
- Wolf-PSORT
Lj0g3v0276439.1 nucl 5, cyto 4, chlo 3, extr 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0276439.1 |
|