Miyakogusa Predicted Gene
- Lj0g3v0276339.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IU96_MEDTR |
542 |
53.5 |
66.6 |
(tr|G7IU96) Ribonuclease P protein subunit p30 OS=Medicago truncatula GN=MTR_2g096090 PE=4 SV=1 |
| TAIR_pep |
AT5G59980.2 |
162 |
53.3 |
68.7 |
| Symbols: | Polymerase/histidinol phosphatase-like | chr5:24147207-24149783 FORWARD LENGTH=705 |
| Medicago |
Medtr2g096090.1 |
543 |
53.7 |
66.7 |
| polymerase/histidinol phosphatase-like protein, putative | HC | chr2:41023372-41018051 | 20130731 |
| Soybean |
Glyma13g26680.1 |
268 |
63.7 |
74.3 |
|
| LJGI |
gnl|LJGI|TC81836 |
2456 |
99.1 |
99.1 |
similar to UniRef100_A8TZE3 Cluster: Enoyl-CoA hydratase/isomerase; n=1; alpha proteobacterium BAL199|Rep: Enoyl-CoA hydratase/isomerase - alpha proteobacterium BAL199, partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0276339.2 |
length: 591 aa. |
| IPR002738 |
RNase P subunit p30 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004540 |
ribonuclease activity |
|
|
| Biological Process |
GO:0008033 |
tRNA processing |
|
|
| HMMPanther |
PTHR13031 |
RIBONUCLEASE |
1.3e-23 |
1-109 |
| HMMPfam |
PF01876 |
RNase_P_p30 |
6e-12 |
2-48 |
| IPR016195 |
Polymerase/histidinol phosphatase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF89550 |
PHP |
2.8e-10 |
3-54 |
| no_ID |
|
| Gene3D |
G3DSA:3.20.20.140 |
no description |
4.5e-14 |
3-55 |
| Seg |
seg |
seg |
NA |
578-591 |
- Wolf-PSORT
Lj0g3v0276339.2 nucl 10, chlo 1, cyto 1, pero 1, cysk 1, cyto_pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0276339.2 |
|