Miyakogusa Predicted Gene

Lj0g3v0276309.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1MAA6_SOYBN 240 47.9 54.8 (tr|I1MAA6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G76980.1 115 41.4 54.7 | Symbols: | BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:28926466-28927242 REVERSE LENGTH=258

Medicago Medtr1g029550.1 147 38.6 45.4 | hypothetical protein | HC | chr1:10168072-10171905 | 20130731

Soybean Glyma14g25540.1 240 47.9 54.8

LJGI gnl|LJGI|TC73384 1084 99.1 99.1 similar to UniRef100_A7NSQ0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0276309.1 length: 302 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 140-160
240-288

Wolf-PSORT

Lj0g3v0276309.1 nucl 12.5, cyto_nucl 7

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0276309.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1MAA6_SOYBN	240	47.9	54.8	(tr\|I1MAA6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G76980.1	115	41.4	54.7	\| Symbols: \| BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). \| chr1:28926466-28927242 REVERSE LENGTH=258
Medicago	Medtr1g029550.1	147	38.6	45.4	\| hypothetical protein \| HC \| chr1:10168072-10171905 \| 20130731
Soybean	Glyma14g25540.1	240	47.9	54.8
LJGI	gnl\|LJGI\|TC73384	1084	99.1	99.1	similar to UniRef100_A7NSQ0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)

no_ID
Lj0g3v0276309.1				length: 302 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	140-160 240-288