Miyakogusa Predicted Gene

Lj0g3v0275509.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LLR1_SOYBN 652 82.8 90.5 (tr|I1LLR1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G58510.1 484 62.7 75.9 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23648287-23654421 REVERSE LENGTH=963
Medicago Medtr3g465600.1 670 85.7 92.0 | Rab3 GTPase-activating protein catalytic subunit | HC | chr3:26564199-26578240 | 20130731
Soybean Glyma11g29320.1 652 82.8 90.5  
LJGI gnl|LJGI|TC71831 946 99.4 99.4 similar to UniRef100_A7NYA5 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0275509.1 length: 376 aa.
IPR026147 Rab3 GTPase-activating protein catalytic subunit
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
HMMPanther PTHR21422 FAMILY 3e-204 1-376
HMMPfam PF13890 Rab3-GTPase_cat 5.1e-53 1-156
no_ID  
HMMPanther PTHR21422:SF3 SUBFAMILY 3e-204 1-376
Seg seg seg NA 90-94
Wolf-PSORT
Lj0g3v0275509.1	nucl 8, nucl_plas 5.5, chlo 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0275509.1 Not targeted -53.225 -16.733 -4.820 79.88% -31.672