Miyakogusa Predicted Gene

Lj0g3v0275429.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MPC1_SOYBN 465 74.1 85.0 (tr|I1MPC1) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT3G59140.1 420 66.7 81.3 | Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453
Medicago Medtr6g034335.1 475 73.4 86.7 | ABC transporter family protein | HC | chr6:11741394-11734594 | 20130731
Soybean Glyma16g28910.1 466 74.1 85.0  
LJGI gnl|LJGI|GO018799 52.0 92.1 92.1 similar to UniRef100_A7Q1J8 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0275429.2 length: 303 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 1.8e-26 6-256
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 2.1e-43 25-296
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 27.682 1-257
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 3.8e-53 15-284
HMMPanther PTHR24223 FAMILY 3.5e-173 1-301
HMMPanther PTHR24223:SF107SUBFAMILY NOT 3.5e-173 1-301
Putative transmembrane regions
  From To
TM segments
SOSUI		 28 50
89 111
119 141
222 244
Wolf-PSORT
Lj0g3v0275429.2	chlo 11.5, chlo_mito 6.5, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0275429.2