Miyakogusa Predicted Gene

Lj0g3v0275419.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7JSC4_MEDTR 1048 44.5 60.6 (tr|G7JSC4) NBS resistance protein-like protein OS=Medicago truncatula GN=MTR_4g020700 PE=4 SV=1
TAIR_pep AT5G36930.2 617 45.3 63.6 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191
Medicago Medtr4g020700.2 1049 44.5 60.6 | disease resistance protein (TIR-NBS-LRR class) | LC | chr4:6645805-6656127 | 20130731
Soybean Glyma16g10080.1 880 47.3 64.5  
LJGI gnl|LJGI|AV770426 886 97.5 97.5 weakly similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago truncatula|Rep: TIR - Medicago truncatula (Barrel medic), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0275419.1 length: 1332 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 9.8e-35 336-467
HMMSmart SM00255 Toll 3.1e-44 333-472
ProfileScan PS50104 TIR 27.708 332-472
superfamily SSF52200 Toll/Interleukin 1.6e-39 331-475
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 7.4e-19 533-548
610-624
703-717
989-1005
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 5.3e-42 22-282
514-770
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.00087 34-169
530-668
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.6e-28 493-740
7-239
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 3.5e-20 331-463
Gene3D G3DSA:3.40.50.300 no description 5.6e-11 34-185
515-678
Gene3D G3DSA:3.80.10.10 no description 2e-17 873-1073
HMMPanther PTHR11017 LEUCINE-RICH 9.5e-207 226-1085
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 9.5e-207 226-1085
Seg seg seg NA 115-131
248-265
1008-1028
1101-1115
superfamily SSF46785 "Winged 1.9e-10 738-846
237-341
superfamily SSF52058 L 1.8e-30 820-1108
Wolf-PSORT
Lj0g3v0275419.1	cyto 5, nucl 4, chlo 2, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0275419.1