Miyakogusa Predicted Gene

Lj0g3v0275209.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6H837_VITVI 655 55.6 70.3 (tr|F6H837) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01310 PE=3 SV=1
TAIR_pep AT1G66920.2 329 35.6 52.7 | Symbols: | Protein kinase superfamily protein | chr1:24965410-24967432 REVERSE LENGTH=617
Medicago Medtr1g028280.1 879 69.5 76.0 | stress-induced receptor-like kinase, putative | HC | chr1:9491291-9487950 | 20130731
Soybean Glyma13g03360.1 464 65.1 79.5  
LJGI gnl|LJGI|TC79254 2230 99.7 99.7 similar to UniRef100_A7QGS6 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0275209.2 length: 624 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.1e-47 303-570
ProfileScan PS50011 PROTEIN_KINASE_DOM 38.746 300-579
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 3e-34 300-572
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 421-433
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 1.6e-76 272-580
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 1.2e-08 235-313
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 306-328
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 1e-28 302-572
IPR025287 Wall-associated receptor kinase galacturonan-binding domain
Molecular Function GO:0030247 polysaccharide binding    
HMMPfam PF13947 GUB_WAK_bind 5.3e-11 28-127
no_ID  
Gene3D G3DSA:1.10.510.10 no description 1.7e-42 364-571
Gene3D G3DSA:3.30.200.20 no description 2.2e-23 314-363
HMMPanther PTHR24420 FAMILY 1.3e-210 24-586
HMMPanther PTHR24420:SF368SUBFAMILY NOT 1.3e-210 24-586
Seg seg seg NA 7-24
154-161
238-253
568-580
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 24
237 259
Wolf-PSORT
Lj0g3v0275209.2	plas 10, E.R. 2, vacu 1, golg 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0275209.2