Miyakogusa Predicted Gene

Lj0g3v0275139.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9HTH7_POPTR 111 29.5 43.9 (tr|B9HTH7) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_659673 PE=4 SV=1
TAIR_pep AT3G12550.2 75.5 54.1 66.2 | Symbols: | XH/XS domain-containing protein | chr3:3978669-3981372 FORWARD LENGTH=638
Medicago Medtr3g067815.1 88.6 57.1 75.3 | XH/XS domain protein | HC | chr3:30442774-30450725 | 20130731
Soybean Glyma18g04290.1 95.1 58.5 76.8  
LJGI gnl|LJGI|GO026970 119 87.5 87.5 similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0275139.1 length: 307 aa.
IPR005379 Uncharacterised domain XH
method AccNumber shortName E-value location
HMMPfam PF03469 XH 6e-22 202-281
no_ID  
Coil coil coiled-coil NA 78-106
139-174
188-224
HMMPanther PTHR21596 RIBONUCLEASE 3.8e-18 9-283
HMMPanther PTHR21596:SF3 TRANSCRIPTION 3.8e-18 9-283
Seg seg seg NA 96-117
Wolf-PSORT
Lj0g3v0275139.1	nucl 8.5, cyto_nucl 7, cyto 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0275139.1