Miyakogusa Predicted Gene

Lj0g3v0274919.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JX88_MEDTR 296 75.9 80.1 (tr|G7JX88) COSII OS=Medicago truncatula GN=MTR_5g057670 PE=2 SV=1
TAIR_pep AT1G13380.1 230 60.2 68.6 | Symbols: | Protein of unknown function (DUF1218) | chr1:4589218-4590362 REVERSE LENGTH=188
Medicago Medtr5g057670.1 296 75.9 80.1 | fiber protein Fb34 | HC | chr5:23809011-23804986 | 20130731
Soybean Glyma08g31000.1 286 72.8 78.5  
LJGI gnl|LJGI|TC61735 1148 100.0 100.0 similar to UniRef100_A7P384 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0274919.1 length: 191 aa.
IPR009606 Protein of unknown function DUF1218
method AccNumber shortName E-value location
HMMPfam PF06749 DUF1218 1.8e-25 61-158
no_ID  
HMMPanther PTHR31769 FAMILY 1.2e-73 6-189
HMMPanther PTHR31769:SF0 SUBFAMILY 1.2e-73 6-189
Seg seg seg NA 9-28
63-73
Putative transmembrane regions
  From To
TM segments
SOSUI		 5 26
60 82
86 108
143 165
Wolf-PSORT
Lj0g3v0274919.1	extr 9, chlo 1, cyto 1, mito 1, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0274919.1