Miyakogusa Predicted Gene
- Lj0g3v0274109.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K640_MEDTR |
889 |
84.7 |
90.2 |
(tr|G7K640) Transmembrane protein 87B OS=Medicago truncatula GN=MTR_5g067670 PE=4 SV=1 |
| TAIR_pep |
AT1G61670.1 |
674 |
66.3 |
79.4 |
| Symbols: | Lung seven transmembrane receptor family protein | chr1:22770132-22772258 FORWARD LENGTH=513 |
| Medicago |
Medtr5g067670.1 |
889 |
84.7 |
90.2 |
| lung seven transmembrane receptor family protein | HC | chr5:28589624-28584736 | 20130731 |
| Soybean |
Glyma07g14850.1 |
630 |
73.8 |
84.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0274109.1 |
length: 532 aa. |
| IPR009637 |
Transmembrane receptor, eukaryota |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPanther |
PTHR21229 |
LUNG |
7e-210 |
3-532 |
| HMMPfam |
PF06814 |
Lung_7-TM_R |
1.1e-107 |
188-474 |
| no_ID |
|
| HMMPanther |
PTHR21229:SF1 |
PTM1 |
7e-210 |
3-532 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
16 |
38 |
| 231 |
253 |
| 262 |
284 |
| 332 |
354 |
| 368 |
390 |
| 412 |
434 |
| 448 |
469 |
- Wolf-PSORT
Lj0g3v0274109.1 plas 7, vacu 4, E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0274109.1 |
|