Miyakogusa Predicted Gene
- Lj0g3v0274039.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L267_SOYBN |
427 |
80.2 |
88.5 |
(tr|K7L267) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G23180.1 |
185 |
45.1 |
62.3 |
| Symbols: | ARM repeat superfamily protein | chr1:8216125-8219515 FORWARD LENGTH=834 |
| Medicago |
Medtr1g031750.2 |
333 |
72.8 |
83.7 |
| armadillo/beta-catenin-like repeat protein, putative | HC | chr1:11138398-11131640 | 20130731 |
| Soybean |
Glyma07g23780.1 |
427 |
80.2 |
88.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0274039.2 |
length: 262 aa. |
| IPR000225 |
Armadillo |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00514 |
Arm |
4e-06 |
55-93 |
| HMMSmart |
SM00185 |
Armadillo/beta-catenin-like |
0.0003 |
54-94 |
| ProfileScan |
PS50176 |
ARM_REPEAT |
8.767 |
65-93 |
| IPR011989 |
Armadillo-like helical |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
4.8e-20 |
178-245 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
7.7e-18 |
25-222 |
- Wolf-PSORT
Lj0g3v0274039.2 cyto 7, chlo 5, extr 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0274039.2 |
|