Miyakogusa Predicted Gene
- Lj0g3v0273739.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L8H2_SOYBN |
351 |
93.9 |
97.2 |
(tr|K7L8H2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G79560.1 |
342 |
89.6 |
94.5 |
| Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH protease 12 | chr1:29926976-29932308 FORWARD LENGTH=1008 |
| Medicago |
Medtr8g056860.1 |
332 |
86.9 |
92.9 |
| ATP-dependent zinc metalloprotease FTSH protein | HC | chr8:18930054-18944115 | 20130731 |
| Soybean |
Glyma08g25840.1 |
332 |
94.2 |
97.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0273739.2 |
length: 183 aa. |
| IPR003959 |
ATPase, AAA-type, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| HMMPfam |
PF00004 |
AAA |
1.7e-17 |
1-90 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
6.8e-31 |
1-163 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.8.60 |
no description |
2.6e-19 |
99-161 |
| Gene3D |
G3DSA:3.40.50.300 |
no description |
4.2e-21 |
1-98 |
| HMMPanther |
PTHR23076 |
METALLOPROTEASE |
4.3e-116 |
1-183 |
| HMMPanther |
PTHR23076:SF1 |
FTSH |
4.3e-116 |
1-183 |
- Wolf-PSORT
Lj0g3v0273739.2 plas 5, cyto 4, chlo 3, mito 2, cyto_nucl 2, cyto_pero 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0273739.2 |
|