Miyakogusa Predicted Gene

Lj0g3v0273569.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L777_SOYBN 556 52.6 70.1 (tr|I1L777) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G66345.1 422 42.5 62.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:24737719-24739353 FORWARD LENGTH=544
Medicago Medtr1g037260.1 631 61.6 75.5 | PPR containing plant protein | HC | chr1:13702972-13699671 | 20130731
Soybean Glyma09g41870.2 556 52.6 70.1  
LJGI gnl|LJGI|BW604015 930 100.0 100.0 weakly similar to UniRef100_A7QB36 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0273569.1 length: 553 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 9.6e-06 388-413
454-480
489-516
HMMPfam PF12854 PPR_1 1.6e-09 341-373
HMMPfam PF13041 PPR_2 4.2e-08 193-238
HMMTigr TIGR00756 PPR: 7.2e-06 314-346
348-379
454-479
489-521
ProfileScan PS51375 PPR 6.928 100-134
190-224
155-189
225-259
310-344
345-379
380-415
416-450
451-485
486-520
521-553
no_ID  
HMMPanther PTHR24015 FAMILY 3.5e-79 43-552
HMMPanther PTHR24015:SF0 SUBFAMILY 3.5e-79 43-552
Wolf-PSORT
Lj0g3v0273569.1	chlo 9.5, chlo_mito 7, mito 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0273569.1