Miyakogusa Predicted Gene

Lj0g3v0273479.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KWF8_SOYBN 479 79.5 84.2 (tr|I1KWF8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60080.1 372 62.5 74.7 | Symbols: | 3'-5'-exoribonuclease family protein | chr1:22152605-22154339 REVERSE LENGTH=302
Medicago Medtr1g007060.1 464 76.4 83.6 | exosome complex exonuclease RRP46 | HC | chr1:171864-178799 | 20130731
Soybean Glyma08g27080.1 479 79.5 84.2  
LJGI gnl|LJGI|TC75646 1273 97.7 97.7 similar to UniRef100_Q2PYZ2 Cluster: 3'-5'-exoribonuclease/RNA binding protein-like protein; n=1; Solanum tuberosum|Rep: 3'-5'-exoribonuclease/RNA binding protein-like protein - Solanum tuberosum (Potato), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0273479.1 length: 303 aa.
IPR001247 Exoribonuclease, phosphorolytic domain 1
method AccNumber shortName E-value location
HMMPfam PF01138 RNase_PH 2.1e-20 47-180
IPR015847 Exoribonuclease, phosphorolytic domain 2
HMMPfam PF03725 RNase_PH_C 5.7e-05 221-265
superfamily SSF55666 Ribonuclease 2.7e-06 211-298
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 1.9e-26 36-184
IPR027408 PNPase/RNase PH domain
Gene3D G3DSA:3.30.230.70 no description 1.2e-05 28-112
no_ID  
HMMPanther PTHR11097 EXOSOME 1.4e-115 5-294
HMMPanther PTHR11097:SF9 EXOSOME 1.4e-115 5-294
Seg seg seg NA 19-32
156-177
Wolf-PSORT
Lj0g3v0273479.1	chlo 4, plas 3, E.R. 3, E.R._plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0273479.1