Miyakogusa Predicted Gene

Lj0g3v0273259.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1N6X6_SOYBN 722 60.4 74.4 (tr|I1N6X6) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G36930.1 365 37.0 56.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188

Medicago Medtr1g019550.1 711 59.8 75.9 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr1:5924682-5918200 | 20130731

Soybean Glyma19g07650.1 718 61.6 75.8

LJGI gnl|LJGI|GO036231 303 84.1 84.1 weakly similar to UniRef100_Q84ZV3 Cluster: R 4 protein; n=2; Glycine max|Rep: R 4 protein - Glycine max (Soybean), partial (21%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0273259.2 length: 628 aa.

IPR000157 Toll/interleukin-1 receptor homology (TIR) domain

method AccNumber shortName E-value location

Molecular Function GO:0005515 protein binding

Biological Process GO:0007165 signal transduction

HMMPfam PF01582 TIR 7.2e-34 10-143

HMMSmart SM00255 Toll 7e-42 7-147

ProfileScan PS50104 TIR 28.469 6-147

superfamily SSF52200 Toll/Interleukin 5.6e-39 1-150

IPR000767 Disease resistance protein

Biological Process GO:0006952 defense response

FPrintScan PR00364 DISEASERSIST 7.6e-22 208-223
282-296
375-389
551-567

IPR002182 NB-ARC

Molecular Function GO:0043531 ADP binding

HMMPfam PF00931 NB-ARC 4.5e-47 188-446

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 7.3e-29 167-412

no_ID

Gene3D G3DSA:3.40.50.10140 no description 2.1e-21 5-123

Gene3D G3DSA:3.40.50.300 no description 2e-10 203-348

HMMPanther PTHR11017 LEUCINE-RICH 2.4e-171 1-607

HMMPanther PTHR11017:SF130DISEASE RESISTANCE 2.4e-171 1-607

Seg seg seg NA 210-221
286-297

superfamily SSF46785 "Winged 7.2e-27 410-518

Wolf-PSORT

Lj0g3v0273259.2 cyto 9, chlo 2, cysk 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0273259.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1N6X6_SOYBN	722	60.4	74.4	(tr\|I1N6X6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G36930.1	365	37.0	56.1	\| Symbols: \| Disease resistance protein (TIR-NBS-LRR class) family \| chr5:14567771-14571907 REVERSE LENGTH=1188
Medicago	Medtr1g019550.1	711	59.8	75.9	\| disease resistance protein (TIR-NBS-LRR class), putative \| LC \| chr1:5924682-5918200 \| 20130731
Soybean	Glyma19g07650.1	718	61.6	75.8
LJGI	gnl\|LJGI\|GO036231	303	84.1	84.1	weakly similar to UniRef100_Q84ZV3 Cluster: R 4 protein; n=2; Glycine max\|Rep: R 4 protein - Glycine max (Soybean), partial (21%)

IPR000157	Toll/interleukin-1 receptor homology (TIR) domain
Lj0g3v0273259.2				length: 628 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005515	protein binding
Biological Process	GO:0007165	signal transduction
HMMPfam	PF01582	TIR	7.2e-34	10-143
HMMSmart	SM00255	Toll	7e-42	7-147
ProfileScan	PS50104	TIR	28.469	6-147
superfamily	SSF52200	Toll/Interleukin	5.6e-39	1-150
IPR000767	Disease resistance protein
Biological Process	GO:0006952	defense response
FPrintScan	PR00364	DISEASERSIST	7.6e-22	208-223 282-296 375-389 551-567
IPR002182	NB-ARC
Molecular Function	GO:0043531	ADP binding
HMMPfam	PF00931	NB-ARC	4.5e-47	188-446
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	7.3e-29	167-412
no_ID
Gene3D	G3DSA:3.40.50.10140	no description	2.1e-21	5-123
Gene3D	G3DSA:3.40.50.300	no description	2e-10	203-348
HMMPanther	PTHR11017	LEUCINE-RICH	2.4e-171	1-607
HMMPanther	PTHR11017:SF130DISEASE	RESISTANCE	2.4e-171	1-607
Seg	seg	seg	NA	210-221 286-297
superfamily	SSF46785	"Winged	7.2e-27	410-518