Miyakogusa Predicted Gene

Lj0g3v0273049.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LHF5_SOYBN 514 61.2 71.7 (tr|K7LHF5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G13660.1 213 35.9 49.8 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59830.2); Has 135 Blast hits to 126 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:4405094-4406983 FORWARD LENGTH=536

Medicago Medtr1g067750.4 607 66.7 75.8 | DNA-binding protein, putative | HC | chr1:29246923-29250052 | 20130731

Soybean Glyma10g05160.1 352 46.6 55.6

LJGI gnl|LJGI|GO024998 539 100.0 100.0 similar to UniRef100_A7PSY5 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0273049.1 length: 523 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 76-88
162-178

Wolf-PSORT

Lj0g3v0273049.1 nucl 11, cysk 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0273049.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LHF5_SOYBN	514	61.2	71.7	(tr\|K7LHF5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G13660.1	213	35.9	49.8	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59830.2); Has 135 Blast hits to 126 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:4405094-4406983 FORWARD LENGTH=536
Medicago	Medtr1g067750.4	607	66.7	75.8	\| DNA-binding protein, putative \| HC \| chr1:29246923-29250052 \| 20130731
Soybean	Glyma10g05160.1	352	46.6	55.6
LJGI	gnl\|LJGI\|GO024998	539	100.0	100.0	similar to UniRef100_A7PSY5 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)

no_ID
Lj0g3v0273049.1				length: 523 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	76-88 162-178