Miyakogusa Predicted Gene

Lj0g3v0272729.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LB83_MEDTR 1712 83.9 90.1 (tr|G7LB83) Lysosomal alpha-mannosidase OS=Medicago truncatula GN=MTR_8g075330 PE=4 SV=1
TAIR_pep AT5G66150.1 1325 65.7 76.8 | Symbols: | Glycosyl hydrolase family 38 protein | chr5:26439013-26444434 REVERSE LENGTH=1047
Medicago Medtr8g075330.1 1712 83.9 90.1 | glycoside hydrolase family 38 protein | HC | chr8:31848061-31856341 | 20130731
Soybean Glyma02g05240.1 1674 83.0 88.8  
LJGI gnl|LJGI|TC64423 2644 99.6 99.6 similar to UniRef100_A7QDV7 Cluster: Chromosome chr4 scaffold_83, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_83, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0272729.1 length: 978 aa.
IPR000602 Glycoside hydrolase family 38, N-terminal domain
method AccNumber shortName E-value location
Molecular Function GO:0004559 alpha-mannosidase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF01074 Glyco_hydro_38 1.4e-87 45-358
IPR011013 Galactose mutarotase-like domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0030246 carbohydrate binding    
superfamily SSF74650 Galactose 3.7e-129 469-978
IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
superfamily SSF88713 Glycoside 2.5e-113 32-361
IPR011682 Glycosyl hydrolase family 38, C-terminal
Biological Process GO:0006013 mannose metabolic process    
Molecular Function GO:0015923 mannosidase activity    
HMMPfam PF07748 Glyco_hydro_38C 3.7e-96 496-975
IPR013780 Glycosyl hydrolase, family 13, all-beta
Gene3D G3DSA:2.60.40.1180 no description 7.8e-38 466-616
IPR015341 Glycoside hydrolase, family 38, central domain
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF09261 Alpha-mann_mid 1.1e-17 364-437
HMMSmart SM00872 Alpha 1e-20 363-437
IPR027291 Glycoside hydrolase 38/57, N-terminal domain
Gene3D G3DSA:3.20.110.10 no description 5e-131 28-360
no_ID  
Gene3D G3DSA:1.20.1270.50 no description 1.5e-27 362-463
Gene3D G3DSA:2.60.40.1360 no description 6.4e-20 903-978
Gene3D G3DSA:2.70.98.30 no description 1.7e-97 617-879
HMMPanther PTHR11607 ALPHA-MANNOSIDASE 0 1-978
HMMPanther PTHR11607:SF3 LYSOSOMAL 0 1-978
Seg seg seg NA 446-457
superfamily SSF88688 Families 3e-26 362-459
Wolf-PSORT
Lj0g3v0272729.1	chlo 4, nucl 2.5, chlo_mito 2.5, vacu 2, cysk_nucl 2, cyto 1, mito 1, plas 1, extr 1, E.R. 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0272729.1