Miyakogusa Predicted Gene
- Lj0g3v0272679.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MXN7_SOYBN |
689 |
86.1 |
91.1 |
(tr|K7MXN7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G19340.1 |
598 |
74.1 |
85.8 |
| Symbols: | Protein of unknown function (DUF3754) | chr3:6701387-6704071 REVERSE LENGTH=487 |
| Medicago |
Medtr7g084200.1 |
663 |
84.0 |
89.0 |
| aminopeptidase | HC | chr7:32470133-32477209 | 20130731 |
| Soybean |
Glyma16g05180.1 |
679 |
85.1 |
90.1 |
|
| LJGI |
gnl|LJGI|TC62507 |
1562 |
99.9 |
99.9 |
similar to UniRef100_A7PA41 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0272679.1 |
length: 382 aa. |
| IPR022227 |
Protein of unknown function DUF3754 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF12576 |
DUF3754 |
1.3e-18 |
155-276 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
91-107 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
205 |
226 |
- Wolf-PSORT
Lj0g3v0272679.1 cyto 7.5, cyto_nucl 5.5, nucl 2.5, E.R. 2, mito 1, vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0272679.1 |
|