Miyakogusa Predicted Gene

Lj0g3v0272429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T8M4_LOTJA 259 87.6 88.3 (tr|I3T8M4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G42740.1 251 84.0 87.5 | Symbols: RPL16A | ribosomal protein large subunit 16A | chr2:17791794-17792946 FORWARD LENGTH=182
Medicago Medtr3g007700.1 253 84.7 88.2 | 50S ribosomal protein L5P | HC | chr3:1126360-1123167 | 20130731
Soybean Glyma12g15800.1 253 84.1 88.3  
LJGI gnl|LJGI|TC58134 872 100.0 100.0 homologue to UniRef100_Q8GTE2 Cluster: Ribosomal protein RL5; n=1; Cicer arietinum|Rep: Ribosomal protein RL5 - Cicer arietinum (Chickpea) (Garbanzo), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0272429.1 length: 147 aa.
IPR002132 Ribosomal protein L5
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR11994 60S 2.5e-102 3-143
HMMPfam PF00281 Ribosomal_L5 2.3e-08 2-28
HMMPfam PF00673 Ribosomal_L5_C 5.1e-22 32-131
IPR020929 Ribosomal protein L5, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00358 RIBOSOMAL_L5 NA 5-21
IPR022803 Ribosomal protein L5 domain
Gene3D G3DSA:3.30.1440.10 no description 4e-66 2-141
superfamily SSF55282 Ribosomal 2.6e-45 1-139
no_ID  
HMMPanther PTHR11994:SF2 60S 2.5e-102 3-143
Seg seg seg NA 101-117
Wolf-PSORT
Lj0g3v0272429.1	cyto 9, chlo 3, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0272429.1