Miyakogusa Predicted Gene
- Lj0g3v0272399.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
| TrEMBL |
I1M3G7_SOYBN |
771 |
87.7 |
89.8 |
(tr|I1M3G7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G54590.2 |
652 |
78.1 |
87.0 |
| Symbols: CRLK1 | Protein kinase superfamily protein | chr5:22180480-22182698 FORWARD LENGTH=440 |
| Medicago |
Medtr2g082430.1 |
757 |
84.5 |
88.2 |
| dual-specificity kinase domain protein | HC | chr2:34549864-34555651 | 20130731 |
| Soybean |
Glyma13g36140.3 |
771 |
87.7 |
89.8 |
|
| LJGI |
gnl|LJGI|TC59747 |
1449 |
100.0 |
100.0 |
similar to UniRef100_A7P113 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0272399.2 |
length: 428 aa. |
| IPR000719 |
Protein kinase, catalytic domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| ProfileScan |
PS50011 |
PROTEIN_KINASE_DOM |
40.372 |
112-378 |
| IPR001245 |
Serine-threonine/tyrosine-protein kinase catalytic domain |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMPfam |
PF07714 |
Pkinase_Tyr |
8e-53 |
114-374 |
| IPR002290 |
Serine/threonine- / dual specificity protein kinase, catalytic domain |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMSmart |
SM00220 |
Serine/Threonine |
1.5e-32 |
112-378 |
| IPR008271 |
Serine/threonine-protein kinase, active site |
| Molecular Function |
GO:0004674 |
protein serine/threonine kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| PatternScan |
PS00108 |
PROTEIN_KINASE_ST |
NA |
232-244 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
1.8e-76 |
86-395 |
| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
| Gene3D |
G3DSA:2.60.120.200 |
no description |
2.2e-05 |
87-125 |
| IPR020635 |
Tyrosine-protein kinase, catalytic domain |
| Molecular Function |
GO:0004713 |
protein tyrosine kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMSmart |
SM00219 |
Tyrosine |
3.1e-47 |
112-374 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.510.10 |
no description |
5.8e-43 |
191-389 |
| Gene3D |
G3DSA:3.30.200.20 |
no description |
5.6e-26 |
126-189 |
| HMMPanther |
PTHR24420 |
FAMILY |
3e-245 |
1-409 |
| HMMPanther |
PTHR24420:SF365SUBFAMILY |
NOT |
3e-245 |
1-409 |
| Seg |
seg |
seg |
NA |
7-26 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
8 |
29 |
- Wolf-PSORT
Lj0g3v0272399.2 chlo 4, extr 3, nucl 2, plas 2, E.R. 2, chlo_mito 2, nucl_plas 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0272399.2 |
|