Miyakogusa Predicted Gene

Lj0g3v0271919.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q40214_LOTJA 432 100.0 100.0 (tr|Q40214) RAB7D OS=Lotus japonicus GN=rab7D PE=2 SV=1
TAIR_pep AT1G52280.1 395 91.3 96.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D | chr1:19468150-19469449 REVERSE LENGTH=206
Medicago Medtr4g012940.1 428 98.6 99.5 | RAB GTPase-like protein A1D | HC | chr4:3466085-3469888 | 20130731
Soybean Glyma08g21940.1 432 100.0 100.0  
LJGI gnl|LJGI|TC60471 1237 100.0 100.0 UniRef100_Q40214 Cluster: RAB7D; n=1; Lotus japonicus|Rep: RAB7D - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0271919.1 length: 207 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 3.2e-39 9-30
32-48
50-72
116-129
154-176
HMMPfam PF00071 Ras 7.4e-55 10-177
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 3.8e-05 14-201
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 8.8e-13 11-179
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 3.3e-92 9-179
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 8.5e-26 10-172
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 1.8e-21 6-179
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-59 4-188
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1e-64 4-189
HMMPanther PTHR24073 FAMILY 1.3e-120 1-207
HMMPanther PTHR24073:SF57 SUBFAMILY 1.3e-120 1-207
ProfileScan PS51419 RAB 31.923 4-207
Wolf-PSORT
Lj0g3v0271919.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0271919.1