Miyakogusa Predicted Gene

Lj0g3v0271059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J832_MEDTR 862 67.5 79.2 (tr|G7J832) Receptor protein kinase-like protein OS=Medicago truncatula GN=MTR_3g082130 PE=4 SV=1
TAIR_pep AT2G34930.1 279 31.2 45.7 | Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905
Medicago Medtr3g082130.1 863 67.5 79.2 | receptor-like protein | HC | chr3:37065344-37062328 | 20130731
Soybean Glyma09g40860.1 785 59.4 71.7  
LJGI gnl|LJGI|FS342874 1328 100.0 100.0 weakly similar to UniRef100_A7QQ00 Cluster: Chromosome undetermined scaffold_139, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_139, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0271059.1 length: 696 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.75 213-234
675-693
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 69 211-235
260-284
617-641
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 1.5e-12 39-77
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.6e-35 36-194
195-446
668-692
HMMPanther PTHR24420 FAMILY 1.4e-82 87-691
Seg seg seg NA 157-169
255-268
614-625
superfamily SSF52047 RNI-like 2.6e-43 85-443
superfamily SSF52058 L 3.6e-33 447-694
Wolf-PSORT
Lj0g3v0271059.1	chlo 8.5, chlo_mito 5, nucl 2, plas 1, extr 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0271059.1