Miyakogusa Predicted Gene

Lj0g3v0271049.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J832_MEDTR 930 66.4 77.3 (tr|G7J832) Receptor protein kinase-like protein OS=Medicago truncatula GN=MTR_3g082130 PE=4 SV=1
TAIR_pep AT2G34930.1 317 32.1 46.2 | Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905
Medicago Medtr3g082130.1 931 66.4 77.3 | receptor-like protein | HC | chr3:37065344-37062328 | 20130731
Soybean Glyma09g40860.1 845 58.9 70.8  
LJGI gnl|LJGI|FS342874 1328 100.0 100.0 weakly similar to UniRef100_A7QQ00 Cluster: Chromosome undetermined scaffold_139, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_139, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0271049.1 length: 766 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.84 213-234
675-693
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 22 211-235
260-284
617-641
695-718
719-743
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 1.7e-12 39-77
no_ID  
FPrintScan PR00019 LEURICHRPT 4.7e-05 698-711
719-732
Gene3D G3DSA:3.80.10.10 no description 2.9e-25 36-222
223-448
457-642
675-761
HMMPanther PTHR24420 FAMILY 4.8e-103 87-761
HMMPfam PF13855 LRR_8 1.2e-06 697-756
Seg seg seg NA 157-169
255-268
614-625
741-756
superfamily SSF52047 RNI-like 5.1e-43 85-443
superfamily SSF52058 L 4e-47 490-762
Wolf-PSORT
Lj0g3v0271049.1	chlo 8.5, chlo_mito 5, nucl 2, plas 1, extr 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0271049.1