Miyakogusa Predicted Gene

Lj0g3v0270709.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JKS4_MEDTR 127 34.9 51.3 (tr|G7JKS4) F-box/kelch-repeat protein OS=Medicago truncatula GN=MTR_4g030830 PE=4 SV=1
TAIR_pep AT4G12560.2 66.6 30.0 47.9 | Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413
Medicago Medtr4g030830.1 127 34.9 51.3 | F-box protein interaction domain protein | LC | chr4:10481298-10482485 | 20130731
Soybean Glyma19g06670.1 118 35.8 48.3  
LJGI gnl|LJGI|TC78617 521 100.0 100.0 similar to UniRef100_A2Q4Y0 Cluster: F-box protein interaction domain; n=1; Medicago truncatula|Rep: F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0270709.1 length: 520 aa.
IPR002156 Ribonuclease H domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004523 ribonuclease H activity    
ProfileScan PS50879 RNASE_H 9.904 364-495
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 8.9e-07 98-181
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 8.3e-19 366-507
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 5.6e-15 7-212
no_ID  
Gene3D G3DSA:3.30.420.10 no description 1.2e-09 368-495
HMMPfam PF13456 RVT_3 1.1e-20 411-494
Seg seg seg NA 384-397
Wolf-PSORT
Lj0g3v0270709.1	nucl 7, chlo 2, cyto 2, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0270709.1