Miyakogusa Predicted Gene

Lj0g3v0270299.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SSC9_LOTJA 202 99.0 100.0 (tr|I3SSC9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G59600.1 137 65.3 84.2 | Symbols: NRPB8B, NRPD8B, NRPE8B | RNA polymerase Rpb8 | chr3:22016629-22017923 FORWARD LENGTH=146
Medicago Medtr1g056890.2 181 86.7 94.9 | DNA-directed RNA polymerase I, II | HC | chr1:24915813-24911971 | 20130731
Soybean Glyma02g26790.5 174 87.2 95.7  
LJGI gnl|LJGI|TC62125 583 100.0 100.0 weakly similar to UniRef100_Q9AXJ3 Cluster: RNA polymerase I, II and III subunit RPB8; n=2; Manihot esculenta|Rep: RNA polymerase I, II and III subunit RPB8 - Manihot esculenta (Cassava) (Manioc), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0270299.2 length: 98 aa.
IPR005570 RNA polymerase, Rpb8
method AccNumber shortName E-value location
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPanther PTHR10917 DNA-DIRECTED 2.8e-46 1-98
HMMPfam PF03870 RNA_pol_Rpb8 6.9e-32 7-98
HMMSmart SM00658 RNA 6.4e-22 2-98
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 4e-30 2-98
superfamily SSF50249 Nucleic 6.3e-28 2-98
no_ID  
HMMPanther PTHR10917:SF0 DNA-DIRECTED 2.8e-46 1-98
Wolf-PSORT
Lj0g3v0270299.2	chlo 7, cyto 4, cyto_nucl 3.33333, cyto_E.R. 2.83333, nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0270299.2